FastME 2.0

FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program: Table 1.

Vincent Lefort Richard Desper Olivier Gascuel

FastME is a distance based phylogeny reconstruction program that works on distance matrices and,
as of v2.0, sequence data.

FastME 2.0 online execution

Form

Account Information

Name

Name your analysis for easy identification

Email address for job notifications

Confirm email

Please confirm your email address

Private

Protect your job with a randomly generated password. You will receive it by email.

Input data

Drag and drop a file or click to browse.

No file selected

PHYLIP format

Number of data sets

min: 1, max: 100

Data type

Substitution Model

Gamma distributed rates across sites

Gamma shape parameter

Substitution Model (DNA)

Substitution model (dna)

Substitution Model (Protein)

Substitution model (protein)

Tree Building

Use starting topology

Starting topology

Starting topology(s)

Drag and drop a file or click to browse.

No file selected

Newick format

Mode

Tree Refinement

Tree topology improvement

Branch length estimation

Select the branch length type to assign to the topology

only available for user starting topology

Tree building - Algorithm

Algorithm

Tree refinement

Branch support

Perform boostrap

0 for no, max: 100

Related tool pages:

FastME 2.0 FastME 2.0 online Download Papers & contacts User guide

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