ATGC Platform

How can we help you ?

The ATGC platform, which was accredited by IBiSA in 2010, is supported by the following Investissement d'Avenir projects: IFB (Institut Français de Bioinformatique), France Génomique and Labex NUMEV. The platform is supported by the MAB (Methods and Algorithms for Bioinformatics) research team.

The platform has a threefold mission: to disseminate the bioinformatics tools developed within the Montpellier community, to encourage collaboration between computer scientists and biologists, and to provide assistance to these researchers by setting up bioinformatics services directly related to their work.

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12804

Annual users

323914

Annual Jobs

3741

Tool Downloads

ATGC is hosted by LIRMM
Stéphane Guindon Sylvain Milanesi Eric Rivals Christophe Menichelli

supported by MAB team

ATGC, a bioinformatic platform for research

The bioinformatic platform provides different kind of services :
Software : available for online analysis or for download.
Datasets : available as online searchable databases or downloadable datasets.
Trainings : short trainings are provided each years.
Support : for our services but also for projects essentially dedicated to NGS analysis.

These services are based on our expertise, issued from our research activities. These involve phylogenetics, molecular evolution, genome dynamics, comparative and functional genomics and transcriptome analysis.

Most of the software and data are (co)authored by researchers from involved labs.

ATGC Platform is financed through Projets d’Investissement d’Avenir (French Government Research and Education long-term investment programs), such as: IFB (Institut Français de Bioinformatique), France Génomique, Labex NUMEV or IBC (Institut de Biologie Computationnelle).

ATGC Platform

Use PhyML

PhyML is a software package that uses modern statistical approaches to analyse alignments of nucleotide or amino acid sequences in a phylogenetic framework.

Use WAVES

WAVES is a web application dedicated to bioinformatic tool integration. It provides an efficient way to implement a service for any bioinformatic software.

IFB member platform

ATGC platform participate to the French Institute of Bioinformatics as a member bla bla bla.

Platform lead team

Sylvain Milanesi

Sylvain Milanesi

Ingénieur d’étude, CNRS

sylvain.milanesi@lirmm.fr

Christophe Menichelli

Christophe Menichelli

Ingénieur de Recherche, CNRS

christophe.menichelli@lirmm.fr

Stéphane Guindon

Stéphane Guindon

Chargé de recherche, CNRS

stephane.guindon@lirmm.fr

Eric Rivals

Eric Rivals

Directeur de recherche, CNRS

eric.rivals@lirmm.fr