ATGC Platform

How can we help you ?

The ATGC platform, which was accredited by IBiSA in 2010, is supported by the following Investissement d'Avenir projects: IFB (Institut Français de Bioinformatique), France Génomique and Labex NUMEV. The platform is supported by the MAB (Methods and Algorithms for Bioinformatics) research team.

The platform has a threefold mission: to disseminate the bioinformatics tools developed within the Montpellier community, to encourage collaboration between computer scientists and biologists, and to provide assistance to these researchers by setting up bioinformatics services directly related to their work.

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Bioinformatic Trainings

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Bioinformatic Tools

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Member involved
ATGC is hosted by LIRMM
Stéphane Guindon Sylvain Milanesi Eric Rivals Christophe Menichelli

supported by MAB team

Achieve your
Goals with ATGC

ATGC was created in 2000 by the MAB team hosted in LIRMM. Since 2012, it is a joint project of IBC (computational biology), LIRMM (computer science) and MiVEGEC (evolution and phylogeny). This bioinformatic platform provides different kind of services :

  • Software: available for online analysis or for download.
  • Data: available as online searchable databases or downloadable datasets.
  • Project support : essentially dedicated to NGS analysis.
  • Project Trainings: we organize each year a 5 days session dedicated to molecular phylogeny and a 4 days session dedicated to NGS analysis.

These services are based on our expertise, issued from our research activities. These involve phylogenetics, molecular evolution, genome dynamics, comparative and functional genomics and transcriptome analysis.
Most of the software and data are (co)authored by researchers from involved labs.

Trainings

we organize trainings dedicated to molecular phylogeny, NGS data analysis and bioinformatic scripting.

Formation – Phylogénie moléculaire – cycle 2
Training
12/03/2024 | 14/03/2024
Avignon

Formation – Phylogénie moléculaire – cycle 2

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1 200,00 EUR
Details
Formation -Pandas : Expertise en Gestion et Analyse de Données
Training
15/05/2024 | 17/05/2024
Monpellier

Formation -Pandas : Expertise en Gestion et Analyse de Données

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1 200,00 EUR
Details
Formation – Phylogénie moléculaire – cycle 1
Training
15/10/2024 | 17/10/2024
Montpellier

Formation – Phylogénie moléculaire – cycle 1

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1 200,00 EUR
Details

ATGC Platform

Use PhyML

PhyML is a software package that uses modern statistical approaches to analyse alignments of nucleotide or amino acid sequences in a phylogenetic framework.
Visit dedicated page

Use WAVES

WAVES is a web application dedicated to bioinformatic tool integration. It provides an efficient way to implement a service for any bioinformatic software.
Visit dedicated page

IFB member platform

ATGC platform participate to the French Institute of Bioinformatics as a member bla bla bla.
Visit dedicated page

Platform lead team

You don't need to face any challenges on your own ; you have our support and assistance.

Sylvain Milanesi

Sylvain Milanesi

Ingénieur d’étude, CNRS

Christophe Menichelli

Christophe Menichelli

Ingénieur de Recherche, CNRS

Partners